The shuttle that would later be known as the S.S. Hawkeye was in an undergound hangar in the nuclear power plant. It was discovered by James' team during the planet's destruction when Shelton remembered a plain white room that turned out to be passage to the hidden hangar. The shuttle was ready for launch, however, somebody needed to reach the control room. Hawkeye sacrificed his organic self to reach the control room and open the hangar bay doors, while his cybernetic self flew the shuttle, with the help of Dr. Joe co-piloting. The shuttle returned to Pelvanida through the Einstein-Rosen bridge with James, Shelton, Dr. Joe, Lockdown, and Seska passenger. (Card of Ten)
While Seska was originally a passenger of the shuttlecraft, she was forcibly ejected and replaced with an anti-matter counterpart upon the shuttle traveling through the Einstein-Rosen bridge.
After the rest of the away team left for other places, Hawkeye flew Neku, Snow, Vic, and Kagetora into Las Vegas, where they fought and escaped Tardigan. After being joined by James, Ender, and Ken, they used the Hawkeye to escape the quarantine zone and return to civilization. However, Hawkeye himself was destroyed by Tardigan. (Ground One)
Another shuttle sat in a hidden hangar underneath the new Sapaar playhouse. Werner learned about its existence when Hawkeye radioed him the coordinates of all the other shuttlecraft in the city. Werner and a mob of Gamanians stormed the playhouse. Werner incapacitated two shuttle guards and used one to fly his shuttle and two others to safety. Werner and his shuttle were instrumental in defeating the Sapaar shuttlecraft outside Gaman's orbit. Later, the shuttle made a controlled crash landing on Gaman's moon, and later abandoned by the passenger's, who included Werner, Seska, Menken, Brut, Kixoo, and the Sapaar shuttle guards. Werner and Hans later used pieces of the shuttle craft to build an Einstein-Rosen bridge.
Hans' shuttle was stored in an unspecified place in the Gamanian city. Hans led a group of Gamanian city folk and successfully took the shuttle, which was unguarded. During the battle with the Sapaar shuttlecraft in low Gaman orbit, Hans' right engine was destroyed, badly crippling the shuttle's mneuvring abilities. The ship made a bad crash landing, and there were few survivors, among them Hans, Ayla, and Falsta. In a few days' time, every survivor except Ayla and Hans died from exposure.
Ayla and Hans were rescued by Werner and joined up with the survivors from Werner's shuttle. Pieces of the shuttle were later used to build an Einstein-Rosen bridge.
A third shuttle was taken by Hamat and an unknown amount of companions without any information or contact with Werner. Hamat killed the Sapaar guards protecting the ship, and Werner remotely flew the ship off of the exploding planet. The shuttle was later destroyed by the Sapaar in a surprise strike in low Gaman orbit.
At least some Sapaar were able to reach shuttle craft of their own. At least two Sapaar shuttlecraft attacked the surviving Gamanian shuttlecraft in low Gaman orbit. Werner scared them off by outflying them. The Sapaar shuttlecraft landed on Gaman's moon and started a colony led by Trano. One of the shuttlecraft was commandeered by Werner minutes before a freak hurricane threatened to kill every Sapaar and Gamanian still alive. Werner used this shuttle to fly both colonies to safety in Brut's cave. (Ship of State)